Unsupervised Feature Extraction Applied to Bioinformatics

Unsupervised Feature Extraction Applied to Bioinformatics
Title Unsupervised Feature Extraction Applied to Bioinformatics PDF eBook
Author Y-h. Taguchi
Publisher Springer Nature
Pages 329
Release 2019-08-23
Genre Technology & Engineering
ISBN 3030224562

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This book proposes applications of tensor decomposition to unsupervised feature extraction and feature selection. The author posits that although supervised methods including deep learning have become popular, unsupervised methods have their own advantages. He argues that this is the case because unsupervised methods are easy to learn since tensor decomposition is a conventional linear methodology. This book starts from very basic linear algebra and reaches the cutting edge methodologies applied to difficult situations when there are many features (variables) while only small number of samples are available. The author includes advanced descriptions about tensor decomposition including Tucker decomposition using high order singular value decomposition as well as higher order orthogonal iteration, and train tenor decomposition. The author concludes by showing unsupervised methods and their application to a wide range of topics. Allows readers to analyze data sets with small samples and many features; Provides a fast algorithm, based upon linear algebra, to analyze big data; Includes several applications to multi-view data analyses, with a focus on bioinformatics.

Unsupervised Feature Extraction Applied to Bioinformatics

Unsupervised Feature Extraction Applied to Bioinformatics
Title Unsupervised Feature Extraction Applied to Bioinformatics PDF eBook
Author Y-h. Taguchi
Publisher Springer Nature
Pages 542
Release
Genre
ISBN 3031609824

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Unsupervised Feature Extraction Applied to Bioinformatics

Unsupervised Feature Extraction Applied to Bioinformatics
Title Unsupervised Feature Extraction Applied to Bioinformatics PDF eBook
Author Y-h Taguchi
Publisher
Pages 329
Release 2020
Genre Bioinformatics
ISBN 9783030224578

Download Unsupervised Feature Extraction Applied to Bioinformatics Book in PDF, Epub and Kindle

This book proposes applications of tensor decomposition to unsupervised feature extraction and feature selection. The author posits that although supervised methods including deep learning have become popular, unsupervised methods have their own advantages. He argues that this is the case because unsupervised methods are easy to learn since tensor decomposition is a conventional linear methodology. This book starts from very basic linear algebra and reaches the cutting edge methodologies applied to difficult situations when there are many features (variables) while only small number of samples are available. The author includes advanced descriptions about tensor decomposition including Tucker decomposition using high order singular value decomposition as well as higher order orthogonal iteration, and train tenor decomposition. The author concludes by showing unsupervised methods and their application to a wide range of topics. Allows readers to analyze data sets with small samples and many features; Provides a fast algorithm, based upon linear algebra, to analyze big data; Includes several applications to multi-view data analyses, with a focus on bioinformatics.

Application Of Omics, Ai And Blockchain In Bioinformatics Research

Application Of Omics, Ai And Blockchain In Bioinformatics Research
Title Application Of Omics, Ai And Blockchain In Bioinformatics Research PDF eBook
Author Jeffrey J P Tsai
Publisher World Scientific
Pages 207
Release 2019-10-14
Genre Science
ISBN 9811203598

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With the increasing availability of omics data and mounting evidence of the usefulness of computational approaches to tackle multi-level data problems in bioinformatics and biomedical research in this post-genomics era, computational biology has been playing an increasingly important role in paving the way as basis for patient-centric healthcare.Two such areas are: (i) implementing AI algorithms supported by biomedical data would deliver significant benefits/improvements towards the goals of precision medicine (ii) blockchain technology will enable medical doctors to securely and privately build personal healthcare records, and identify the right therapeutic treatments and predict the progression of the diseases.A follow-up in the publication of our book Computation Methods with Applications in Bioinformatics Analysis (2017), topics in this volume include: clinical bioinformatics, omics-based data analysis, Artificial Intelligence (AI), blockchain, big data analytics, drug discovery, RNA-seq analysis, tensor decomposition and Boolean network.

Computational Methods With Applications In Bioinformatics Analysis

Computational Methods With Applications In Bioinformatics Analysis
Title Computational Methods With Applications In Bioinformatics Analysis PDF eBook
Author Jeffrey J P Tsai
Publisher World Scientific
Pages 233
Release 2017-06-09
Genre Science
ISBN 981320799X

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This compendium contains 10 chapters written by world renowned researchers with expertise in semantic computing, genome sequence analysis, biomolecular interaction, time-series microarray analysis, and machine learning algorithms.The salient feature of this book is that it highlights eight types of computational techniques to tackle different biomedical applications. These techniques include unsupervised learning algorithms, principal component analysis, fuzzy integral, graph-based ensemble clustering method, semantic analysis, interolog approach, molecular simulations and enzyme kinetics.The unique volume will be a useful reference material and an inspirational read for advanced undergraduate and graduate students, computer scientists, computational biologists, bioinformatics and biomedical professionals.

Data Analytics in Bioinformatics

Data Analytics in Bioinformatics
Title Data Analytics in Bioinformatics PDF eBook
Author Rabinarayan Satpathy
Publisher John Wiley & Sons
Pages 433
Release 2021-01-20
Genre Computers
ISBN 111978560X

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Machine learning techniques are increasingly being used to address problems in computational biology and bioinformatics. Novel machine learning computational techniques to analyze high throughput data in the form of sequences, gene and protein expressions, pathways, and images are becoming vital for understanding diseases and future drug discovery. Machine learning techniques such as Markov models, support vector machines, neural networks, and graphical models have been successful in analyzing life science data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. Machine Learning in Bioinformatics compiles recent approaches in machine learning methods and their applications in addressing contemporary problems in bioinformatics approximating classification and prediction of disease, feature selection, dimensionality reduction, gene selection and classification of microarray data and many more.

Computational Methods of Feature Selection

Computational Methods of Feature Selection
Title Computational Methods of Feature Selection PDF eBook
Author Huan Liu
Publisher CRC Press
Pages 437
Release 2007-10-29
Genre Business & Economics
ISBN 1584888792

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Due to increasing demands for dimensionality reduction, research on feature selection has deeply and widely expanded into many fields, including computational statistics, pattern recognition, machine learning, data mining, and knowledge discovery. Highlighting current research issues, Computational Methods of Feature Selection introduces the