Special Protein Molecules Computational Identification

Special Protein Molecules Computational Identification
Title Special Protein Molecules Computational Identification PDF eBook
Author Quan Zou
Publisher MDPI
Pages 305
Release 2018-08-09
Genre Science
ISBN 3038970433

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This book is a printed edition of the Special Issue "Special Protein Molecules Computational Identification" that was published in IJMS

Molecular Biology of the Cell

Molecular Biology of the Cell
Title Molecular Biology of the Cell PDF eBook
Author
Publisher
Pages 0
Release 2002
Genre Cells
ISBN 9780815332183

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Advances in Computational Biology

Advances in Computational Biology
Title Advances in Computational Biology PDF eBook
Author H.O. Villar
Publisher Elsevier
Pages 281
Release 1996-05-31
Genre Science
ISBN 008052611X

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The second volume in a series which aims to focus on advances in computational biology. This volume discusses such topics as: statistical analysis of protein sequences; progress in large-scale sequence analysis; and the architecture of loops in proteins.

Protein-Protein Interaction Networks

Protein-Protein Interaction Networks
Title Protein-Protein Interaction Networks PDF eBook
Author Stefan Canzar
Publisher Humana
Pages 0
Release 2019-10-04
Genre Science
ISBN 9781493998722

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This volume explores techniques that study interactions between proteins in different species, and combines them with context-specific data, analysis of omics datasets, and assembles individual interactions into higher-order semantic units, i.e., protein complexes and functional modules. The chapters in this book cover computational methods that solve diverse tasks such as the prediction of functional protein-protein interactions; the alignment-based comparison of interaction networks by SANA; using the RaptorX-ComplexContact webserver to predict inter-protein residue-residue contacts; the docking of alternative confirmations of proteins participating in binary interactions and the visually-guided selection of a docking model using COZOID; the detection of novel functional units by KeyPathwayMiner and how PathClass can use such de novo pathways to classify breast cancer subtypes. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary hardware- and software, step-by-step, readily reproducible computational protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, Protein-Protein Interaction Networks: Methods and Protocols is a valuable resource for both novice and expert researchers who are interested in learning more about this evolving field.

Advances in Protein Molecular and Structural Biology Methods

Advances in Protein Molecular and Structural Biology Methods
Title Advances in Protein Molecular and Structural Biology Methods PDF eBook
Author Timir Tripathi
Publisher Academic Press
Pages 716
Release 2022-01-14
Genre Science
ISBN 0323902650

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Advances in Protein Molecular and Structural Biology Methods offers a complete overview of the latest tools and methods applicable to the study of proteins at the molecular and structural level. The book begins with sections exploring tools to optimize recombinant protein expression and biophysical techniques such as fluorescence spectroscopy, NMR, mass spectrometry, cryo-electron microscopy, and X-ray crystallography. It then moves towards computational approaches, considering structural bioinformatics, molecular dynamics simulations, and deep machine learning technologies. The book also covers methods applied to intrinsically disordered proteins (IDPs)followed by chapters on protein interaction networks, protein function, and protein design and engineering. It provides researchers with an extensive toolkit of methods and techniques to draw from when conducting their own experimental work, taking them from foundational concepts to practical application. - Presents a thorough overview of the latest and emerging methods and technologies for protein study - Explores biophysical techniques, including nuclear magnetic resonance, X-ray crystallography, and cryo-electron microscopy - Includes computational and machine learning methods - Features a section dedicated to tools and techniques specific to studying intrinsically disordered proteins

Biological Sequence Analysis

Biological Sequence Analysis
Title Biological Sequence Analysis PDF eBook
Author Richard Durbin
Publisher Cambridge University Press
Pages 372
Release 1998-04-23
Genre Science
ISBN 113945739X

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Probabilistic models are becoming increasingly important in analysing the huge amount of data being produced by large-scale DNA-sequencing efforts such as the Human Genome Project. For example, hidden Markov models are used for analysing biological sequences, linguistic-grammar-based probabilistic models for identifying RNA secondary structure, and probabilistic evolutionary models for inferring phylogenies of sequences from different organisms. This book gives a unified, up-to-date and self-contained account, with a Bayesian slant, of such methods, and more generally to probabilistic methods of sequence analysis. Written by an interdisciplinary team of authors, it aims to be accessible to molecular biologists, computer scientists, and mathematicians with no formal knowledge of the other fields, and at the same time present the state-of-the-art in this new and highly important field.

Special Protein Molecules Computational Identification

Special Protein Molecules Computational Identification
Title Special Protein Molecules Computational Identification PDF eBook
Author Quan Zou
Publisher
Pages
Release 2018
Genre
ISBN 9783038970446

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Special Protein Molecules Computational Identification.