Physarum Machines

Physarum Machines
Title Physarum Machines PDF eBook
Author Andrew Adamatzky
Publisher World Scientific
Pages 281
Release 2010
Genre Computers
ISBN 9814327581

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A Physarum machine is a programmable amorphous biological computer experimentally implemented in the vegetative state of true slime mould Physarum polycephalum. It comprises an amorphous yellowish mass with networks of protoplasmic veins, programmed by spatial configurations of attracting and repelling gradients. This book demonstrates how to create experimental Physarum machines for computational geometry and optimization, distributed manipulation and transportation, and general-purpose computation. Being very cheap to make and easy to maintain, the machine also functions on a wide range of substrates and in a broad scope of environmental conditions. As such a Physarum machine is a 'green' and environmentally friendly unconventional computer. The book is readily accessible to a nonprofessional reader, and is a priceless source of experimental tips and inventive theoretical ideas for anyone who is inspired by novel and emerging non-silicon computers and robots. An account on Physarum Machines can be viewed at http: //www.youtube.com/user/PhysarumMachines.

Biodiversity of Fungi

Biodiversity of Fungi
Title Biodiversity of Fungi PDF eBook
Author Mercedes S. Foster
Publisher Elsevier
Pages 797
Release 2011-04-28
Genre Science
ISBN 0080470262

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Biodiversity of Fungi is essential for anyone collecting and/or monitoring any fungi. Fascinating and beautiful, fungi are vital components of nearly all ecosystems and impact human health and our economy in a myriad of ways. Standardized methods for documenting diversity and distribution have been lacking. A wealth of information, especially regrading sampling protocols, compiled by an international team of fungal biologists, make Biodiversity of Fungi an incredible and fundamental resource for the study of organismal biodiversity. Chapters cover everything from what is a fungus, to maintaining and organizing a permanent study collection with associated databases; from protocols for sampling slime molds to insect associated fungi; from fungi growing on and in animals and plants to mushrooms and truffles. The chapters are arranged both ecologically and by sampling method rather than by taxonomic group for ease of use. The information presented here is intended for everyone interested in fungi, anyone who needs tools to study them in nature including naturalists, land managers, ecologists, mycologists, and even citizen scientists and sophiscated amateurs. - Covers all groups of fungi - from molds to mushrooms, even slime molds - Describes sampling protocols for many groups of fungi - Arranged by sampling method and ecology to coincide with users needs - Beautifully illustrated to document the range of fungi treated and techniques discussed - Natural history data are provided for each group of fungi to enable users to modify suggested protocols to meet their needs

Myxomycetes

Myxomycetes
Title Myxomycetes PDF eBook
Author Steven L. Stephenson
Publisher Timber Press
Pages 204
Release 2000-06-15
Genre Science
ISBN 9780881924398

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This book identifies all the species one is likely to encounter, with extensive information on their structural features, distribution, and ecological associations. Superbly illustrated, including keys, it is an introduction to their biology as well as a field guide. This book is only available through print on demand. All interior art is black and white.

Advances in Physarum Machines

Advances in Physarum Machines
Title Advances in Physarum Machines PDF eBook
Author Andrew Adamatzky
Publisher Springer
Pages 830
Release 2016-01-09
Genre Technology & Engineering
ISBN 3319266624

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This book is devoted to Slime mould Physarum polycephalum, which is a large single cell capable for distributed sensing, concurrent information processing, parallel computation and decentralized actuation. The ease of culturing and experimenting with Physarum makes this slime mould an ideal substrate for real-world implementations of unconventional sensing and computing devices The book is a treatise of theoretical and experimental laboratory studies on sensing and computing properties of slime mould, and on the development of mathematical and logical theories of Physarum behavior. It is shown how to make logical gates and circuits, electronic devices (memristors, diodes, transistors, wires, chemical and tactile sensors) with the slime mould. The book demonstrates how to modify properties of Physarum computing circuits with functional nano-particles and polymers, to interface the slime mould with field-programmable arrays, and to use Physarum as a controller of microbial fuel cells. A unique multi-agent model of slime is shown to serve well as a software slime mould capable for solving problems of computational geometry and graph optimization. The multiagent model is complemented by cellular automata models with parallel accelerations. Presented mathematical models inspired by Physarum include non-quantum implementation of Shor's factorization, structural learning, computation of shortest path tree on dynamic graphs, supply chain network design, p-adic computing and syllogistic reasoning. The book is a unique composition of vibrant and lavishly illustrated essays which will inspire scientists, engineers and artists to exploit natural phenomena in designs of future and emergent computing and sensing devices. It is a 'bible' of experimental computing with spatially extended living substrates, it spanstopics from biology of slime mould, to bio-sensing, to unconventional computing devices and robotics, non-classical logics and music and arts.

The Geometry of Biological Time

The Geometry of Biological Time
Title The Geometry of Biological Time PDF eBook
Author Arthur T. Winfree
Publisher Springer Science & Business Media
Pages 543
Release 2013-06-29
Genre Mathematics
ISBN 3662224925

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As 1 review these pages, the last of them written in Summer 1978, some retrospec tive thoughts come to mind which put the whole business into better perspective for me and might aid the prospective reader in choosing how to approach this volume. The most conspicuous thought in my mind at present is the diversity of wholly independent explorations that came upon phase singularities, in one guise or another, during the past decade. My efforts to gather the published literature during the last phases of actually writing a whole book about them were almost equally divided between libraries of Biology, Chemistry, Engineering, Mathematics, Medicine, and Physics. A lot of what 1 call "gathering " was done somewhat in anticipation in the form of cönjecture, query, and prediction based on analogy between developments in different fields. The consequence throughout 1979 was that our long-suffering publisher re peatedly had to replace such material by citation of unexpected flurries of papers giving substantive demonstration. 1 trust that the authors of these many excellent reports, and especially of those I only found too late, will forgive the brevity of allusion I feIt compelled to observe in these substitutions. A residue of loose ends is largely collected in the index under "QUERIES. " It is c1ear to me already that the materials I began to gather several years ago represented only the first flickering of what turns out to be a substantial conflagration.

From Cells to Organisms

From Cells to Organisms
Title From Cells to Organisms PDF eBook
Author Sherrie L. Lyons
Publisher University of Toronto Press
Pages 291
Release 2020-07-20
Genre History
ISBN 1442635096

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This book uses the history of cell theory to explore the emergence of biology as a distinct field in its own right--separate from anatomy, physiology, and natural history. It also explores nineteenth- and twentieth-century ideas about heredity and development and the progress that was made at the turn of the century when they began to be studied on their own--leading to new understandings of a variety of biological problems, from evolution to cancer. Investigating this story will help readers gain an appreciation of the historical development of scientific ideas. It beautifully illustrates that the process of science is not as straightforward as it is usually portrayed. One of the important lessons of this intriguing story is that "facts" do not necessarily speak for themselves, and observations always need to be interpreted.

The Silence of Slime Mould

The Silence of Slime Mould
Title The Silence of Slime Mould PDF eBook
Author Andrew Adamatzky
Publisher Luniver Press
Pages 66
Release 2014-12-01
Genre Computers
ISBN 1905986432

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The art works are the outcomes of scientific experiments that aimed to design computing devices made from slime mould. Slime mould Physarum polycephalum is a single-cell organism visible by the unaided eye. The slime mould computes by optimising its shape, electrical activity or location in response to stimulations. This fascinating mix of art and science offers an awe-inspiring look at the ways in which slime mould explores its environment and performs computation. Art works allow us to see the world through the "eyes" of the slime mould and show that the absence of a brain does not exclude an amorphous living creature from intelligence.