This book constitutes the refereed proceedings of the Third International Workshop on Mining Complex Data, MCD 2007, held in Warsaw, Poland, in September 2007, co-located with ECML and PKDD 2007. The 20 revised full papers presented were carefully reviewed and selected; they present original results on knowledge discovery from complex data. In contrast to the typical tabular data, complex data can consist of heterogenous data types, can come from different sources, or live in high dimensional spaces. All these specificities call for new data mining strategies.

This book is about inductive databases and constraint-based data mining, emerging research topics lying at the intersection of data mining and database research. The aim of the book as to provide an overview of the state-of- the art in this novel and - citing research area. Of special interest are the recent methods for constraint-based mining of global models for prediction and clustering, the uni?cation of pattern mining approaches through constraint programming, the clari?cation of the re- tionship between mining local patterns and global models, and the proposed in- grative frameworks and approaches for inducive databases. On the application side, applications to practically relevant problems from bioinformatics are presented. Inductive databases (IDBs) represent a database view on data mining and kno- edge discovery. IDBs contain not only data, but also generalizations (patterns and models) valid in the data. In an IDB, ordinary queries can be used to access and - nipulate data, while inductive queries can be used to generate (mine), manipulate, and apply patterns and models. In the IDB framework, patterns and models become ”?rst-class citizens” and KDD becomes an extended querying process in which both the data and the patterns/models that hold in the data are queried.

System Biology encompasses the knowledge from diverse fields such as Molecular Biology, Immunology, Genetics, Computational Biology, Mathematical Biology, etc. not only to address key questions that are not answerable by individual fields alone, but also to help in our understanding of the complexities of biological systems. Whole genome expression studies have provided us the means of studying the expression of thousands of genes under a particular condition and this technique had been widely used to find out the role of key macromolecules that are involved in biological signaling pathways. However, making sense of the underlying complexity is only possible if we interconnect various signaling pathways into human and computer readable network maps. These maps can then be used to classify and study individual components involved in a particular phenomenon. Apart from transcriptomics, several individual gene studies have resulted in adding to our knowledge of key components that are involved in a signaling pathway. It therefore becomes imperative to take into account of these studies also, while constructing our network maps to highlight the interconnectedness of the entire signaling pathways and the role of that particular individual protein in the pathway. This collection of articles will contain a collection of pioneering work done by scientists working in regulatory signaling networks and the use of large scale gene expression and omics data. The distinctive features of this book would be: Act a single source of information to understand the various components of different signaling network (roadmap of biochemical pathways, the nature of a molecule of interest in a particular pathway, etc.), Serve as a platform to highlight the key findings in this highly volatile and evolving field, and Provide answers to various techniques both related to microarray and cell signaling to the readers.

This book constitutes the thoroughly refereed post-conference proceedings of the Third International Workshop on New Frontiers in Mining Complex Patterns, NFMCP 2014, held in conjunction with ECML-PKDD 2014 in Nancy, France, in September 2014. The 13 revised full papers presented were carefully reviewed and selected from numerous submissions. They illustrate advanced data mining techniques which preserve the informative richness of complex data and allow for efficient and effective identification of complex information units present in such data. The papers are organized in the following sections: classification and regression; clustering; data streams and sequences; applications.

This book constitutes the thoroughly refereed conference proceedings of the First International Workshop on New Frontiers in Mining Complex Patterns, NFMCP 2012, held in conjunction with ECML/PKDD 2012, in Bristol, UK, in September 2012. The 15 revised full papers were carefully reviewed and selected from numerous submissions. The papers are organized in topical sections on mining rich (relational) datasets, mining complex patterns from miscellaneous data, mining complex patterns from trajectory and sequence data, and mining complex patterns from graphs and networks.