This is the first book devoted to chimera states - peculiar partial synchronization patterns in networks. Providing an overview of the state of the art in research on this topic, it explores how these hybrid states, which are composed of spatially separated domains of synchronized and desynchronized behavior, arise surprisingly in networks of identical units and symmetric coupling topologies. The book not only describes various types of chimeras, but also discusses the role of time delay, stochasticity, and network topology for these synchronization-desynchronization patterns. Moreover, it addresses the question of robustness and control of chimera states, which have various applications in physics, biology, chemistry, and engineering. This book is intended for researchers with a background in physics, applied mathematics, or engineering. Of great interest to specialists working on related problems, it is also a valuable resource for newcomers to the field and other scientists working on the control of spatio-temporal patterns.

The focus of this thesis is the interplay of synchrony and adaptivity in complex networks. Synchronization is a ubiquitous phenomenon observed in different contexts in physics, chemistry, biology, neuroscience, medicine, socioeconomic systems, and engineering. Most prominently, synchronization takes place in the brain, where it is associated with cognitive capacities like learning and memory, but is also a characteristic of neurological diseases like Parkinson and epilepsy. Adaptivity is common in many networks in nature and technology, where the connectivity changes in time, i.e., the strength of the coupling is continuously adjusted depending upon the dynamic state of the system, for instance synaptic neuronal plasticity in the brain. This research contributes to a fundamental understanding of various synchronization patterns, including hierarchical multifrequency clusters, chimeras and other partial synchronization states. After a concise survey of the fundamentals of adaptive and complex dynamical networks and synaptic plasticity, in the first part of the thesis the existence and stability of cluster synchronization in globally coupled adaptive networks is discussed for simple paradigmatic phase oscillators as well as for a more realistic neuronal oscillator model with spike-timing dependent plasticity. In the second part of the thesis the interplay of adaptivity and connectivity is investigated for more complex network structures like nonlocally coupled rings, random networks, and multilayer systems. Besides presenting a plethora of novel, sometimes intriguing patterns of synchrony, the thesis makes a number of pioneering methodological advances, where rigorous mathematical proofs are given in the Appendices. These results are of interest not only from a fundamental point of view, but also with respect to challenging applications in neuroscience and technological systems.

The book summarizes the state-of-the-art of research on control of self-organizing nonlinear systems with contributions from leading international experts in the field. The first focus concerns recent methodological developments including control of networks and of noisy and time-delayed systems. As a second focus, the book features emerging concepts of application including control of quantum systems, soft condensed matter, and biological systems. Special topics reflecting the active research in the field are the analysis and control of chimera states in classical networks and in quantum systems, the mathematical treatment of multiscale systems, the control of colloidal and quantum transport, the control of epidemics and of neural network dynamics.

This book is about coexistence patterns in ensembles of globally coupled nonlinear oscillators. Coexistence patterns in this respect are states of a dynamical system in which the dynamics in some parts of the system differ significantly from those in other parts, even though there is no underlying structural difference between the different parts. In other words, these asymmetric patterns emerge in a self-organized manner. As our main model, we use ensembles of various numbers of Stuart-Landau oscillators, all with the same natural frequency and all coupled equally strongly to each other. Employing computer simulations, bifurcation analysis and symmetry considerations, we uncover the mechanism behind a wide range of complex patterns found in these ensembles. Our starting point is the creation of so-called chimeras, which are subsequently treated within a new and broader context of related states.

The focus of this thesis are synchronization phenomena in networks and their intrinsic control through time delay, which is ubiquitous in real-world systems ranging from physics and acoustics to neuroscience and engineering. We encounter synchronization everywhere and it can be either a helpful or a detrimental mechanism. In the first part, after a survey of complex nonlinear systems and networks, we show that a seemingly simple system of two organ pipes gives birth to complex bifurcation and synchronization scenarios. Going from a 2-oscillator system to a ring of oscillators, we encounter the intriguing phenomenon of chimera states which are partial synchrony patterns with coexisting domains of synchronized and desynchronized dynamics. For more than a decade scientist have tried to solve the puzzle of this spontaneous symmetry-breaking emerging in networks of identical elements. We provide an analysis of initial conditions and extend our model by the addition of time delay and fractal connectivities. In the second part, we investigate partial synchronization patterns in a neuronal network and explain dynamical asymmetry arising from the hemispheric structure of the human brain. A particular focus is on the novel scenario of partial relay synchronization in multiplex networks. Such networks allow for synchronization of the coherent domains of chimera states via a remote layer, whereas the incoherent domains remain desynchronized. The theoretical framework is demonstrated with different generic models.

The Handbook of Computational Neurodegeneration provides a comprehensive overview of the field and thus bridges the gap between standard textbooks of research on neurodegeneration and dispersed publications for specialists that have a narrowed focus on computational methods to study this complicated process. The handbook reviews the central issues and methodological approaches related to the field for which the reader pursues a thorough overview. It also conveys more advanced knowledge, thus serving both as an introductory text and as a starting point for an in-depth study of a specific area, as well as a quick reference source for the expert by reflecting the state of the art and future prospects. The book includes topics that are usually missing in standard textbooks and that are only marginally represented in the specific literature. The broad scope of this handbook is reflected by five major parts that facilitate an integration of computational concepts, methods and applications in the study of neurodegeneration. Each part is intended to stand on its own, giving an overview of the topic and the most important problems and approaches, which are supported by examples, practical applications, and proposed methodologies. The basic concepts and knowledge, standard procedures and methods are presented, as well as recent advances and new perspectives.