Understanding the response of soil microbial communities and decomposition to global environmental changes is central to our ability to accurately forecast future terrestrial carbon (C) storage and atmospheric CO2 levels. Increases in the frequency and severity of disturbance events are one element of global change in terrestrial ecosystems. The goal of this dissertation was to measure the response of soil microbial communities and decomposition to disturbance events and to examine the mechanisms underlying post-disturbance changes in decomposition. In the first part of my dissertation work I explored these questions within the context of wildfires in boreal forests. Chapter 1 characterized soil microbial communities and the rate of decomposition across a fire chronosequence in interior Alaska. I found that boreal forest fires reduced soil microbial abundance, altered fungal community composition, and suppressed litter decomposition. Chapter 2 investigated whether soil microbial responses to boreal forest fires differ as a function of fire severity. I demonstrated that higher severity fires elicited greater reductions in soil microbial biomass and larger shifts in fungal community composition than lower severity fires. Chapter 3 tested the mechanisms through which boreal forest fires alter decomposition processes. I discovered that decomposition rates were slower in recently burned forests because of post-fire reductions in soil moisture and C substrate quality. In the second part of my dissertation I expanded my findings to other types of disturbance events using meta-analysis. Chapter 4 reviewed the response of soil microbial biomass to fires. I found that soil microbial biomass was significantly lower in recently burned ecosystems, but the response of microbial biomass to fire differed by fire type and biome. Chapter 5 examined soil microbial responses to abiotic (fire, harvesting, storms) and biotic (insect infestation, pathogen outbreaks) disturbances in forests. I observed that abiotic disturbances significantly reduced soil microbial biomass, while changes in microbial biomass were non-significant following biotic disturbance events. Collectively, these findings suggest that reductions in soil microbial biomass and decomposition rates following abiotic disturbances are likely to slow the transfer of C from soils to the atmosphere and provide a negative feedback to rising atmospheric CO2 concentrations and global change.

Forest ecosystems are often disturbed by agents such as harvesting, fire, wind, insects and diseases, and acid deposition, with differing intensities and frequencies. Such disturbances can markedly affect the amount, form, and stability of soil organic carbon in, and the emission of greenhouse gases, including CO2, CH4, and N2O from, forest ecosystems. It is vitally important that we improve our understanding of the impact of different disturbance regimes on forest soil carbon dynamics and greenhouse gas emissions to guide our future research, forest management practices, and policy development. This Special Issue provides an important update on the disturbance effects on soil carbon and greenhouse gas emissions in forest ecosystems in different climate regions.

Soil Carbon in Sensitive European Ecosystems - From Science to Land Management is a comprehensive overview of the latest research in this field drawn together by a network of scientists from across Europe. Soil carbon assessments are crucial at present to our understanding of the dynamics of terrestrial ecosystems and our ability to assess implications for the global carbon exchange and its consequences on the future climate. This book focuses primarily on ecosystems and their soil carbon stocks. The book identifies three key sensitive ecosystems within Europe: Mediterranean Forest and Agricultural Systems; Mountains; and Peatland. Contributors include those currently working for the European research programme, COST Action 639 BurnOut (www.cost639.net; 2006-2010). COST Action 639 emerged from a demand from policy makers in Europe for more detailed information on soil carbon dynamics. The cooperation between experts for reporting and experts for soil dynamics is the focus of the book. This book seeks to provide an up-to-date account on the state-of-the-art research within this topical field.

The goal of this project was to investigate changes in the structure of dissolved and solid phase organic matter, the production of CO2 and CH4, and the composition of decomposer microbial communities in response to the climatic forcing of environmental processes that determine the balance between carbon gas production versus storage and sequestration in peatlands. Cutting-edge analytical chemistry and next generation sequencing of microbial genes were been applied to habitats at the Marcell Experimental Forest (MEF), where the US DOE's Oak Ridge National Laboratory and the USDA Forest Service are constructing a large-scale ecosystem study entitled, "Spruce and Peatland Responses Under Climatic and Environmental Change"(SPRUCE). Our study represented a comprehensive characterization of the sources, transformation, and decomposition of organic matter in the S1 bog at MEF. Multiple lines of evidence point to distinct, vertical zones of organic matter transformation: 1) the acrotelm consisting of living mosses, root material, and newly formed litter (0-30 cm), 2) the mesotelm, a mid-depth transition zone (30-75 cm) characterized by labile organic C compounds and intense decomposition, and 3) the underlying catotelm (below 75cm) characterized by refractory organic compounds as well as relatively low decomposition rates. These zones are in part defined by physical changes in hydraulic conductivity and water table depth. O-alkyl-C, which represents the carbohydrate fraction in the peat, was shown to be an excellent proxy for soil decomposition rates. The carbon cycle in deep peat was shown to be fueled by modern carbon sources further indicating that hydrology and surface vegetation play a role in belowground carbon cycling. We provide the first metagenomic study of an ombrotrophic peat bog, with novel insights into microbial specialization and functions in this unique terrestrial ecosystem. Vertical structuring of microbial communities closely paralleled the chemical evolution of peat, with large shifts in microbial populations occurring in the biogeochemical hotspot, the mesotelm, where the highest rates of decomposition were detected. Stable isotope geochemistry and potential rates of methane production paralleled vertical changes in methanogen community composition to indicate a predominance of acetoclastic methanogenesis mediated by the Methanosarcinales in the mesotelm, while hydrogen-utilizing methanogens dominated in the deeper catotelm. Evidence pointed to the availability of phosphorus as well as nitrogen limiting the microbially-mediated turnover of organic carbon at MEF. Prior to initiation of the experimental treatments, our study provided key baseline data for the SPRUCE site on the vertical stratification of peat decomposition, key enzymatic pathways, and microbial taxa containing these pathways. The sensitivity of soil carbon turnover to climate change is strongly linked to recalcitrant carbon stocks and the temperature sensitivity of decomposition is thought to increase with increasing molecular complexity of carbon substrates. This project delivered results on how climate change perturbations impact the microbially-mediated turnover of recalcitrant organic matter in peatland forest soils, both under controlled conditions in the laboratory and at the ecosystem-scale in the field. This project revisited the concept of "recalcitrance" in the regulation of soil carbon turnover using a combination of natural abundance radiocarbon and optical spectroscopic measurements on bulk DOM, and high resolution molecular characterization of DOM. The project elucidated how organic matter reactivity and decomposition will respond to climate change in a both a qualitative (organic matter lability) and quantitiative (increased rates) manner. An Aromaticity Index was developed to represent a more direct and accurate parameter for modeling of DOM reactivity in peatlands. The abundance and community composition o ...

This open access book synthesizes leading-edge science and management information about forest and rangeland soils of the United States. It offers ways to better understand changing conditions and their impacts on soils, and explores directions that positively affect the future of forest and rangeland soil health. This book outlines soil processes and identifies the research needed to manage forest and rangeland soils in the United States. Chapters give an overview of the state of forest and rangeland soils research in the Nation, including multi-decadal programs (chapter 1), then summarizes various human-caused and natural impacts and their effects on soil carbon, hydrology, biogeochemistry, and biological diversity (chapters 2–5). Other chapters look at the effects of changing conditions on forest soils in wetland and urban settings (chapters 6–7). Impacts include: climate change, severe wildfires, invasive species, pests and diseases, pollution, and land use change. Chapter 8 considers approaches to maintaining or regaining forest and rangeland soil health in the face of these varied impacts. Mapping, monitoring, and data sharing are discussed in chapter 9 as ways to leverage scientific and human resources to address soil health at scales from the landscape to the individual parcel (monitoring networks, data sharing Web sites, and educational soils-centered programs are tabulated in appendix B). Chapter 10 highlights opportunities for deepening our understanding of soils and for sustaining long-term ecosystem health and appendix C summarizes research needs. Nine regional summaries (appendix A) offer a more detailed look at forest and rangeland soils in the United States and its Affiliates.

Several textbooks and edited volumes are currently available on general soil fertility but‚ to date‚ none have been dedicated to the study of “Sustainable Carbon and Nitrogen Cycling in Soil.” Yet this aspect is extremely important, considering the fact that the soil, as the ‘epidermis of the Earth’ (geodermis)‚ is a major component of the terrestrial biosphere. This book addresses virtually every aspect of C and N cycling, including: general concepts on the diversity of microorganisms and management practices for soil, the function of soil’s structure-function-ecosystem, the evolving role of C and N, cutting-edge methods used in soil microbial ecological studies, rhizosphere microflora, the role of organic matter (OM) in agricultural productivity, C and N transformation in soil, biological nitrogen fixation (BNF) and its genetics, plant-growth-promoting rhizobacteria (PGPRs), PGPRs and their role in sustainable agriculture, organic agriculture, etc. The book’s main objectives are: (1) to explain in detail the role of C and N cycling in sustaining agricultural productivity and its importance to sustainable soil management; (2) to show readers how to restore soil health with C and N; and (3) to help them understand the matching of C and N cycling rules from a climatic perspective. Given its scope, the book offers a valuable resource for educators, researchers, and policymakers, as well as undergraduate and graduate students of soil science, soil microbiology, agronomy, ecology, and the environmental sciences. Gathering cutting-edge contributions from internationally respected researchers, it offers authoritative content on a broad range of topics, which is supplemented by a wealth of data, tables, figures, and photographs. Moreover, it provides a roadmap for sustainable approaches to food and nutritional security, and to soil sustainability in agricultural systems, based on C and N cycling in soil systems.